README – Recombining Split FASTQ Files (Linux)

These FASTQ files were split into ~2 GB chunks due to Dataverse upload limits.
To reconstruct the original files after downloading all parts:

# For I1
cat p22240-s005_JJ-8_S56_L003_I1.part.* > p22240-s005_JJ-8_S56_L003_I1_001.fastq.gz

# For I2
cat p22240-s005_JJ-8_S56_L003_I2.part.* > p22240-s005_JJ-8_S56_L003_I2_001.fastq.gz

# For R1
cat p22240-s005_JJ-8_S56_L003_R1.part.* > p22240-s005_JJ-8_S56_L003_R1_001.fastq.gz

# For R2
cat p22240-s005_JJ-8_S56_L003_R2.part.* > p22240-s005_JJ-8_S56_L003_R2_001.fastq.gz

After running these commands, you’ll have the original FASTQ.gz files back.
